Programme EVD Guéris: Rapport Préliminaire.

WHO|University of California San Diego
chaillona@who.int

1 At a glance

2 Population characteristics

This dataset include 1139 unique individuals.

Descriptive

Demographics at initial visit
Characteristic	N = 1,1391
gender
femme	627 (55%)
homme	512 (45%)
occupation
Agriculteur	315 (30%)
Autre	115 (11%)
Enfant	183 (18%)
Étudiant	45 (4.3%)
Femme au foyer	208 (20%)
Fonctionnaire d'Etat	14 (1.3%)
Minier	18 (1.7%)
Personne d'affaire	44 (4.2%)
Professeur/Universitaire	10 (1.0%)
Professionnel de santé	89 (8.5%)
age_years	29 (20, 40)
nombre_visite	1.00 (1.00, 1.00)
temperature	36.40 (36.10, 36.70)
frequence_respiratoire	18.50 (18.00, 20.00)
frequence_cardiaque	80 (73, 90)
poids_kg	53 (45, 60)
taille_cm	153 (149, 158)
nombre_visite_psychologique	1.00 (1.00, 1.00)
diabete_Nutrition	0 (0%)
hypertension	0 (0%)
surpoids	0 (0%)
obesite	0 (0%)
1 n (%); Median (IQR)

Variables structure de sante need clean up/harmonization

Number of participants through time

Visits

2.0.1 At a glance

Number of visits
1139 rows x 1 cols
	Column	Plot Overview	Missing	Mean	Median	SD
	num_visit		0.0%	17.9	19.0	5.8

Participants underwent a mean of 17.94 visits (min=1, max=44).

2.0.2 Distribution

Duration of follow-up

2.0.3 At a glance

Duration of follow up (years)
1139 rows x 1 cols
	Column	Plot Overview	Missing	Mean	Median	SD
	Follow up duration (years)		0.1%	2.1	1.9	0.8

Participants were followed for a mean duration of 2.14 years (min=0.03, max=4.52).

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For the Complications and Comorbidities, I considered any report during the study period as a yes.

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3 Comorbidities

3.1 Overall

3.2 By age groups

4 Complications

4.1 Overall

4.2 By age groups

5 Missingness

Original dataset with 2 months bin

Original dataset with 6 months bin

6 Evaluation des méthodes

Scenarios proposés:

Original dataset

Filling all

Filling by time period

Comparison

Prevalence comparison at 12 months

7 Clinical evaluation

Dichotomized variables overtime with trends

variable	6 months	12 months	18 months	24 months	36 months	Average	Improvement
rougeur_oculaire	2.48	2.24	0.96	0.46	0.52	1.33	79.03
flou_visuel	4.22	3.95	2.72	2.88	7.85	4.32	-86.02
sensation_grattage	6.43	4.76	3.24	2.30	15.18	6.38	-136.08
eblouissement	0.46	0.09	0.18	0.00	1.05	0.36	-128.26
douleur_mobilisation_globe_oculaire	0.83	0.54	0.96	1.04	0.52	0.78	37.35
photophobie_vision	4.41	2.33	2.37	1.96	2.62	2.74	40.59
injection_conjonctivale_rouge	1.19	0.72	0.26	0.12	0.52	0.56	56.3
ictere_conjonctival_jaune	0.46	0.18	0.09	0.00	1.57	0.46	-241.3
sensibilite_lumiere	2.39	0.63	0.26	0.23	2.09	1.12	12.55
nystagmus	0.46	0.00	0.09	0.00	0.00	0.11	100
cou	26.32	13.16	13.11	11.32	6.25	14.03	76.25
sacro_iliaque	23.08	11.11	7.69	8.57	0.00	10.09	100
epaule	7.69	3.70	2.56	2.86	0.00	3.36	100
genou	28.57	17.86	15.00	16.67	30.00	21.62	-5.01
genou_gauche	66.67	75.00	60.00	80.00	66.67	69.67	0
genou_droit	0.00	33.33	50.00	0.00	100.00	36.67	-Inf
gonflement_cheville	25.00	18.52	17.50	21.62	20.00	20.53	20
cheville_gauche	33.33	25.00	20.00	40.00	50.00	33.67	-50.02
cheville_droite	33.33	40.00	50.00	57.14	0.00	36.09	100
gonflement_doigt	7.69	3.85	2.63	2.86	11.11	5.63	-44.47
gonflement_poignet	0.00	0.00	2.86	3.03	22.22	5.62	-Inf
etic_autres	0.00	0.00	0.00	0.00	0.00	0.00	0
abdomen_sensible	0.28	0.45	0.88	1.38	6.81	1.96	-2332.14
foie_palpable	0.28	0.09	0.00	0.23	0.00	0.12	100
rate_palpable	0.09	0.09	0.09	0.00	0.00	0.05	100
oedeme_membres_superieur	0.09	0.09	0.00	0.00	0.00	0.04	100
oedeme_membres_inferieur	0.09	0.00	0.00	0.00	0.52	0.12	-477.78
souffles	0.00	0.27	0.18	0.35	0.00	0.16	0
deplacement_choc_pointe	0.00	0.00	0.09	0.00	0.00	0.02	0
oedeme_extremite_inferieure	0.00	0.00	0.00	0.00	0.00	0.00	0
turgescence_veine_jugulaire	0.09	0.09	0.09	0.00	0.00	0.05	100
murmures_vesiculaires	65.62	70.89	63.86	60.71	42.41	60.70	35.37
rales_auscultation	0.18	0.54	0.44	0.35	0.00	0.30	100
sifflement	0.46	0.36	0.26	0.23	0.00	0.26	100
eruption_cutanee	1.75	1.80	2.02	1.15	2.62	1.87	-49.71
tonus_musculaire	0.00	0.00	0.00	0.00	0.00	0.00	0
troubles_sensitifs	100.00	100.00	100.00	100.00	100.00	100.00	0
troubles_equilibre_coordination_mouvements	100.00	100.00	100.00	100.00	100.00	100.00	0
troubies_sommeil	100.00	100.00	100.00	100.00	100.00	100.00	0
trouble_langage	100.00	100.00	100.00	100.00	100.00	100.00	0

Dichotomized variables overtime

Clinical variables
When several visits in a time bin, the last one is carried forward
Characteristic	6 months, N = 1,1101	12 months, N = 1,1181	18 months, N = 1,1441	24 months, N = 8711	36 months, N = 1911
rougeur_oculaire	27 (2.5%)	25 (2.2%)	11 (1.0%)	4 (0.5%)	1 (0.5%)
flou_visuel	46 (4.2%)	44 (3.9%)	31 (2.7%)	25 (2.9%)	15 (7.9%)
sensation_grattage	70 (6.4%)	53 (4.8%)	37 (3.2%)	20 (2.3%)	29 (15%)
eblouissement	5 (0.5%)	1 (<0.1%)	2 (0.2%)	0 (0%)	2 (1.0%)
douleur_mobilisation_globe_oculaire	9 (0.8%)	6 (0.5%)	11 (1.0%)	9 (1.0%)	1 (0.5%)
photophobie_vision	48 (4.4%)	26 (2.3%)	27 (2.4%)	17 (2.0%)	5 (2.6%)
injection_conjonctivale_rouge	13 (1.2%)	8 (0.7%)	3 (0.3%)	1 (0.1%)	1 (0.5%)
ictere_conjonctival_jaune	5 (0.5%)	2 (0.2%)	1 (<0.1%)	0 (0%)	3 (1.6%)
sensibilite_lumiere	26 (2.4%)	7 (0.6%)	3 (0.3%)	2 (0.2%)	4 (2.1%)
nystagmus	5 (0.5%)	0 (0%)	1 (<0.1%)	0 (0%)	0 (0%)
cou	5 (26%)	5 (13%)	8 (13%)	6 (11%)	1 (6.3%)
sacro_iliaque	3 (23%)	3 (11%)	3 (7.7%)	3 (8.6%)	0 (0%)
epaule	1 (7.7%)	1 (3.7%)	1 (2.6%)	1 (2.9%)	0 (0%)
genou	4 (29%)	5 (18%)	6 (15%)	6 (17%)	3 (30%)
genou_gauche	2 (67%)	3 (75%)	3 (60%)	4 (80%)	2 (67%)
genou_droit	0 (0%)	1 (33%)	2 (50%)	0 (0%)	2 (100%)
gonflement_cheville	3 (25%)	5 (19%)	7 (18%)	8 (22%)	2 (20%)
cheville_gauche	1 (33%)	1 (25%)	1 (20%)	2 (40%)	1 (50%)
cheville_droite	1 (33%)	2 (40%)	3 (50%)	4 (57%)	0 (0%)
gonflement_doigt	1 (7.7%)	1 (3.8%)	1 (2.6%)	1 (2.9%)	1 (11%)
gonflement_poignet	0 (0%)	0 (0%)	1 (2.9%)	1 (3.0%)	2 (22%)
etic_autres	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)
abdomen_sensible	3 (0.3%)	5 (0.4%)	10 (0.9%)	12 (1.4%)	13 (6.8%)
foie_palpable	3 (0.3%)	1 (<0.1%)	0 (0%)	2 (0.2%)	0 (0%)
rate_palpable	1 (<0.1%)	1 (<0.1%)	1 (<0.1%)	0 (0%)	0 (0%)
oedeme_membres_superieur	1 (<0.1%)	1 (<0.1%)	0 (0%)	0 (0%)	0 (0%)
oedeme_membres_inferieur	1 (<0.1%)	0 (0%)	0 (0%)	0 (0%)	1 (0.5%)
souffles	0 (0%)	3 (0.3%)	2 (0.2%)	3 (0.3%)	0 (0%)
deplacement_choc_pointe	0 (0%)	0 (0%)	1 (<0.1%)	0 (0%)	0 (0%)
oedeme_extremite_inferieure	0 (0%)	0 (0%)	0 (0%)	0 (0%)	0 (0%)
turgescence_veine_jugulaire	1 (<0.1%)	1 (<0.1%)	1 (<0.1%)	0 (0%)	0 (0%)
murmures_vesiculaires	712 (66%)	789 (71%)	728 (64%)	527 (61%)	81 (42%)
rales_auscultation	2 (0.2%)	6 (0.5%)	5 (0.4%)	3 (0.3%)	0 (0%)
sifflement	5 (0.5%)	4 (0.4%)	3 (0.3%)	2 (0.2%)	0 (0%)
eruption_cutanee	19 (1.8%)	20 (1.8%)	23 (2.0%)	10 (1.2%)	5 (2.6%)
tonus_musculaire	NA (NA, NA)	NA (NA, NA)	NA (NA, NA)	NA (NA, NA)	NA (NA, NA)
troubles_sensitifs	30 (100%)	9 (100%)	9 (100%)	6 (100%)	1 (100%)
troubles_equilibre_coordination_mouvements	44 (100%)	43 (100%)	23 (100%)	19 (100%)	5 (100%)
troubies_sommeil	36 (100%)	28 (100%)	30 (100%)	17 (100%)	21 (100%)
trouble_langage	13 (100%)	10 (100%)	3 (100%)	1 (100%)	2 (100%)
1 n (%); Median (IQR)

Other variables

Other variables
Only baseline data are shown
Characteristic	N = 1,1391
marche
autres (typer)	3 (0.3%)
impossible	5 (0.6%)
normale	880 (98%)
soutenue	6 (0.7%)
spastique	1 (0.1%)
Unknown	244
duree_actuelle_tonus_musculaire
1	0 (0%)
3	1 (20%)
35	1 (20%)
6	0 (0%)
permanent	2 (40%)
ras	0 (0%)
variable	1 (20%)
Unknown	1,134
type_tonus_musculaire
hypotrophy	0 (0%)
hypotrophy of the right upper limb	0 (0%)
muscle atrophy	0 (0%)
myasthenia	1 (100%)
post-stroke	0 (0%)
right hemiparesis	0 (0%)
right upper limb	0 (0%)
Unknown	1,138
bicipital
exagérés	0 (0%)
hyporeflexique	0 (0%)
normal	888 (100%)
Unknown	251
force_musculaire
abolie	2 (0.2%)
conservée	888 (99%)
diminuée	9 (1.0%)
Unknown	240
duree_actuelle_force_musculaire
1 month	1 (50%)
10 month	0 (0%)
permanent	1 (50%)
with aging	0 (0%)
Unknown	1,137
duree_actuelle_equilibre_coordination_mouvement
10 months	0 (0%)
12 months	0 (0%)
16 months	0 (0%)
2 months	1 (20%)
2 years	0 (0%)
3 jours	0 (0%)
3 months	1 (20%)
3 years	0 (0%)
Permanent	2 (40%)
Variable	1 (20%)
Unknown	1,134
duree_actuelle_trouble_langage
1 monht	1 (33%)
2 weeks	0 (0%)
3 months	0 (0%)
3 years	0 (0%)
4 days	0 (0%)
permanent	1 (33%)
ras	1 (33%)
Unknown	1,136
1 n (%)

Initial evaluation

8 Clinical presentation overtime

When several visits in a time bin, the last visit is carried forward.

First 9 months cases

Select which period(s) you want to consider I *excluded signs present in ≤2 individuals**.

Overall

## structure(c(3L, 4L, 5L, 8L, 7L, 6L, 1L, 9L, 2L, NA), levels = c("Below 1", 
## "1 to ≤5", "6 to ≤15", "16 to ≤25", "26 to ≤35", "36 to ≤45", 
## "46 to ≤55", "56 to ≤65", "Above 65"), class = "factor")

Below 1 year old

1 to 5 years old

6-15 years old

16-25 years old

26-35 years old

46-55 years old

56-65 years old

36-45 years old

Above 65 years old

Male only

Female only

First 3 years

Overall

Male only

Female only

9 Psychological evaluation

Within the first 3 months

Overall

Male only

Female only

At 12 months

Overall

Male only

Female only

At 24 months

Overall

Male only

Female only

10 Psychological evaluation : QALY impact

At 6 months

At 12 months

At 18 months

At 24 months

At 36 months

11 Clinical presentation : day by day prevalence trends

Prevalence since ECT exit (interactive)

Minimum prevalence set to 10 cases. Select the variable you want.

Number of individuals reporting since ECT exit (interactive)

Minimum prevalence set to 10 cases.

Side by side: Individuals reporting since ECT exit (interactive)

Minimum prevalence set to 10 cases.

12 Disease burden

12 months

24 months

36 months

13 Exploration analyses: clustering

data prep and grouping

The parameters used:

• Threshold to drop variable: 99%

At which step of the pre-processing do I set the NAs to zero, in the instances we want to do so? For now it is after source selection and dropping those with >80% NA

13.1 MCA

Number of dimensions

Kaiser criterion: select dimensions with eigenvalue > 1.

When all eigenvalues are below 1 in an MCA analysis, it means that there is no clear evidence of a dominant factor that explains most of the variability in the data. In which case, it is not appropriate to select the number of factors based on the Kaiser criterion.

n_dim <- which(eigen$cumulative.variance.percent > 80)[1]

In such case I choose to select enough dimensions to explain 80% of the variability, ie here N dimensions = 11.

This needs to be discussed

fviz_screeplot(mca_1)

# Perform MCA analysis on data with variable names
mca_2 <- MCA(data_mca[, -c(1)], graph = FALSE, ncp = n_dim)
# mca_2 <- MCA(data_mca, graph = FALSE, ncp = n_dim)
# mca_lab_2 <- MCA(data_mca_lab[, -c(1)], graph = FALSE, ncp = n_dim)

# Perform MCA analysis on data with labels
mca_lab_2 <- MCA(data_mca_lab[, -c(1)], graph = FALSE, ncp = n_dim)

13.1.1 MCA dimentions description

Dim 1

# Plot variable contribution
fviz_contrib(mca_2, choice = "var", axes = 1)

Dim 2

# Plot variable contribution
fviz_contrib(mca_lab_2, choice = "var", axes = 2)

Dim 3

# Plot variable contribution
fviz_contrib(mca_lab_2, choice = "var", axes = 3)

Dim 4

# Plot variable contribution
fviz_contrib(mca_lab_2, choice = "var", axes = 4)

MCA projection

HCA

For now, the number of clusters automatically chosen based on highest relative loss of inertia (i(clusters n+1)/i(cluster n)).

Inertia measures how spread out the data points within each cluster are. It is defined as the sum of the squared distances between each data point and the centroid of the cluster to which it has been assigned. Lower values of inertia indicate that the data points are closer to their respective centroids, implying more compact clusters, whereas higher values suggest that the data points are more spread out from the centroids, indicating less coherent clusters.

13.2 Cluster composition

Main clusters

Symptom frequency by cluster

Other cluster numbers

Symptom frequency by cluster

Symptom frequency by cluster

Symptom frequency by cluster

Symptom frequency by cluster

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Overview of the other data and distribution.

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14 Other variables

14.1 Symptoms

Mix of categorized and ordinal

Fever

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
fievre [factor]	1. non 2. oui	19921 (95.4%) 966 ( 4.6%)		20887 (98.6%)	303 (1.4%)
fievre_q1 [factor]	1. non 2. oui	1432 (27.0%) 3881 (73.0%)		5313 (25.1%)	15877 (74.9%)
fievre_q2 [factor]	1. non 2. oui	3681 (89.9%) 413 (10.1%)		4094 (19.3%)	17096 (80.7%)
fievre_q3 [factor]	1. non 2. oui	889 (23.4%) 2912 (76.6%)		3801 (17.9%)	17389 (82.1%)
fievre_q4 [factor]	1. non 2. oui	503 (13.4%) 3251 (86.6%)		3754 (17.7%)	17436 (82.3%)
fievre_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	1551 (51.1%) 1376 (45.3%) 109 ( 3.6%)		3036 (14.3%)	18154 (85.7%)

Tiredness

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
fatigue [factor]	1. non 2. oui	19152 (91.7%) 1732 ( 8.3%)		20884 (98.6%)	306 (1.4%)
fatigue_q1 [factor]	1. non 2. oui	2388 (27.8%) 6200 (72.2%)		8588 (40.5%)	12602 (59.5%)
fatigue_q2 [factor]	1. non 2. oui	1096 (17.1%) 5329 (82.9%)		6425 (30.3%)	14765 (69.7%)
fatigue_q3 [factor]	1. non 2. oui	200 ( 3.4%) 5662 (96.6%)		5862 (27.7%)	15328 (72.3%)
fatigue_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	2630 (46.6%) 2688 (47.7%) 321 ( 5.7%)		5639 (26.6%)	15551 (73.4%)

Other similar variables:

Similar variables include fievre, fatigue, faiblesse, anorexie, mal_de_gorge, maux_de_tete, nausee, douleurs_thoraciques, difficulte_respiratoire, difficulte_avaler, douleurs_abdominales, diarrhee, vomissement, troubles_sommeil, engourdissement_extremites, sueur_froide, stress, perte_equilibre, rhumato, douleurs_musculaires, douleurs_lombaires, autre_rhumato, ophtalmo..

Symptoms with free text

For example the variable autre_med_generale includes 56 unique entries such as NA, RAS, Non, Perte de mémoire, confusion, Eternuement, Perte de mémoire, Insomnie, INSOMNIE, PRURIT ANALE, ND.

Similar variables include autre_med_generale, autre_rhumato, autre_ophtalmo, autre_orl, autre_symptome_clinique, autre_complication_cte, autre_maladie_anterieure, autre_symptome_vision, autre_uro_genital, autre_gonflement_articulaire_1, autre_gonflement_articulaire_2, autre_gonflement_articulaire_3, autre_pulmonaire, autre_raison_pas_regle_apres_ebola, autre_test_laboratoire..

14.2 Psychological evaluation

Ordinal psychological symptoms

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
maux_de_tete_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	945 ( 7.6%) 6816 (55.1%) 4610 (37.3%)		12371 (58.4%)	8819 (41.6%)
maux_destomac_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	494 ( 8.2%) 3170 (52.4%) 2384 (39.4%)		6048 (28.5%)	15142 (71.5%)
fatigue_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	1410 (10.4%) 7065 (52.0%) 5122 (37.7%)		13597 (64.2%)	7593 (35.8%)
tristesse_douleur_morale_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	848 ( 6.9%) 6983 (57.0%) 4430 (36.1%)		12261 (57.9%)	8929 (42.1%)
retrait_social_isolement_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	705 (13.6%) 2630 (50.8%) 1845 (35.6%)		5180 (24.4%)	16010 (75.6%)
pensees_suicidaires_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	214 (10.3%) 946 (45.7%) 912 (44.0%)		2072 (9.8%)	19118 (90.2%)
fort_sentiment_de_culpabilite_honte_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	601 ( 8.7%) 3092 (45.0%) 3183 (46.3%)		6876 (32.4%)	14314 (67.6%)
problemes_de_sommeil_recurrents_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	636 ( 8.4%) 4293 (56.6%) 2661 (35.1%)		7590 (35.8%)	13600 (64.2%)
difficulte_dendormissement_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	838 ( 9.8%) 4551 (53.4%) 3139 (36.8%)		8528 (40.2%)	12662 (59.8%)
manque_dappetit_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	480 ( 7.1%) 4199 (62.0%) 2090 (30.9%)		6769 (31.9%)	14421 (68.1%)
perturbations_sexuelles_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	408 ( 7.9%) 2310 (45.0%) 2419 (47.1%)		5137 (24.2%)	16053 (75.8%)
symptomes_danxiete_frequents_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	484 ( 6.5%) 3429 (46.1%) 3527 (47.4%)		7440 (35.1%)	13750 (64.9%)
sentiment_que_lavenir_est_bouche_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	489 ( 7.1%) 2777 (40.6%) 3575 (52.3%)		6841 (32.3%)	14349 (67.7%)
difficulte_reprendre_activites_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	384 ( 7.1%) 2301 (42.7%) 2703 (50.2%)		5388 (25.4%)	15802 (74.6%)
hyper_vigilance_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	111 ( 6.8%) 643 (39.2%) 886 (54.0%)		1640 (7.7%)	19550 (92.3%)
reaction_sursaut_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	178 (15.8%) 650 (57.6%) 300 (26.6%)		1128 (5.3%)	20062 (94.7%)
comportement_agite_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	222 (10.9%) 819 (40.1%) 1002 (49.0%)		2043 (9.6%)	19147 (90.4%)
souvenirs_repetitifs_situations_liees_a_ebola_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	1071 ( 8.7%) 5455 (44.1%) 5854 (47.3%)		12380 (58.4%)	8810 (41.6%)
reves_repetitifs_lies_a_ebola_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	586 (12.0%) 1744 (35.8%) 2542 (52.2%)		4872 (23.0%)	16318 (77.0%)
abus_dalcool_ou_substance_psy_q5 [ordered, factor]	1. pas du tout 2. un peu 3. beaucoup	108 ( 7.2%) 631 (42.3%) 752 (50.4%)		1491 (7.0%)	19699 (93.0%)
rappel_evenement_ebola_ravivait_sentiment [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	12742 (62.8%) 3156 (15.6%) 3313 (16.3%) 789 ( 3.9%) 275 ( 1.4%)		20275 (95.7%)	915 (4.3%)
se_reveille_nuit_regulierement [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	14196 (70.0%) 2261 (11.1%) 2666 (13.1%) 937 ( 4.6%) 221 ( 1.1%)		20281 (95.7%)	909 (4.3%)
differente_chose_fait_penser_a_ebola [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	8616 (42.5%) 3833 (18.9%) 4652 (22.9%) 2869 (14.1%) 312 ( 1.5%)		20282 (95.7%)	908 (4.3%)
irritable_et_colere [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	11679 (57.6%) 3012 (14.9%) 2854 (14.1%) 2364 (11.7%) 373 ( 1.8%)		20282 (95.7%)	908 (4.3%)
pensee_et_rappelle_me_bouleverse [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	13102 (64.6%) 3125 (15.4%) 3175 (15.7%) 729 ( 3.6%) 151 ( 0.7%)		20282 (95.7%)	908 (4.3%)
sans_vouloir_je_repense_a_ebola [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	8373 (41.3%) 4833 (23.9%) 4780 (23.6%) 2275 (11.2%) 0 ( 0.0%)		20261 (95.6%)	929 (4.4%)
avoir_impression_ebola_n_est_jamais_arrive [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	18183 (89.7%) 975 ( 4.8%) 661 ( 3.3%) 364 ( 1.8%) 99 ( 0.5%)		20282 (95.7%)	908 (4.3%)
tenir_loi_decequi_fait_penser [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	15587 (76.9%) 2706 (13.3%) 1298 ( 6.4%) 569 ( 2.8%) 113 ( 0.6%)		20273 (95.7%)	917 (4.3%)
image_evenement_ebola_surgissent_dans_ma_tete [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	9375 (46.2%) 4285 (21.1%) 3869 (19.1%) 2577 (12.7%) 171 ( 0.8%)		20277 (95.7%)	913 (4.3%)
nerveux_sursaute_facilement [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	13419 (66.2%) 3435 (16.9%) 2291 (11.3%) 965 ( 4.8%) 167 ( 0.8%)		20277 (95.7%)	913 (4.3%)
essayer_pas_y_penser [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	15401 (75.9%) 2678 (13.2%) 1529 ( 7.5%) 594 ( 2.9%) 78 ( 0.4%)		20280 (95.7%)	910 (4.3%)
conscient_avoir_emotion_ebola [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	11274 (55.6%) 4266 (21.0%) 3650 (18.0%) 977 ( 4.8%) 111 ( 0.5%)		20278 (95.7%)	912 (4.3%)
sentiment_ebola_fige [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	10121 (49.9%) 4478 (22.1%) 4068 (20.1%) 1542 ( 7.6%) 59 ( 0.3%)		20268 (95.6%)	922 (4.4%)
reaction_comme_pendant_ebola [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	16498 (81.4%) 1983 ( 9.8%) 1347 ( 6.6%) 381 ( 1.9%) 64 ( 0.3%)		20273 (95.7%)	917 (4.3%)
mal_a_mendormir [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	15062 (74.3%) 1992 ( 9.8%) 2021 (10.0%) 1129 ( 5.6%) 67 ( 0.3%)		20271 (95.7%)	919 (4.3%)
sentiments_intenses_a_propos_debola [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	12019 (59.3%) 3273 (16.1%) 3574 (17.6%) 1289 ( 6.4%) 125 ( 0.6%)		20280 (95.7%)	910 (4.3%)
effacer_ebola_de_ma_memoire [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	12643 (62.3%) 3644 (18.0%) 2947 (14.5%) 970 ( 4.8%) 76 ( 0.4%)		20280 (95.7%)	910 (4.3%)
mal_a_me_concentrer [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	11897 (58.7%) 3161 (15.6%) 2893 (14.3%) 2212 (10.9%) 105 ( 0.5%)		20268 (95.6%)	922 (4.4%)
ce_qui_rappelle_ebola_cause_reaction_physique [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	17210 (84.9%) 1778 ( 8.8%) 894 ( 4.4%) 353 ( 1.7%) 45 ( 0.2%)		20280 (95.7%)	910 (4.3%)
reve_ebola [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	17059 (84.1%) 2091 (10.3%) 775 ( 3.8%) 279 ( 1.4%) 76 ( 0.4%)		20280 (95.7%)	910 (4.3%)
etre_aux_aguets [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	17193 (84.8%) 2059 (10.2%) 779 ( 3.8%) 186 ( 0.9%) 64 ( 0.3%)		20281 (95.7%)	909 (4.3%)
essayer_pas_en_parler [ordered, factor]	1. pas du tout 2. un peu 3. moyennement 4. beaucoup 5. extremement	16771 (82.7%) 2293 (11.3%) 924 ( 4.6%) 216 ( 1.1%) 71 ( 0.4%)		20275 (95.7%)	915 (4.3%)
plaisir_faire_des_choses [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	14060 (69.3%) 4512 (22.2%) 1201 ( 5.9%) 506 ( 2.5%)		20279 (95.7%)	911 (4.3%)
triste_sans_espoir_ou_deprime [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	12422 (61.3%) 4450 (21.9%) 2789 (13.8%) 619 ( 3.1%)		20280 (95.7%)	910 (4.3%)
difficulte_a_sendormir_dormir_ou_dormir_trop [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	14083 (69.4%) 3850 (19.0%) 2088 (10.3%) 260 ( 1.3%)		20281 (95.7%)	909 (4.3%)
fatigue_ou_peu_denergie [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	11851 (58.4%) 5417 (26.7%) 2382 (11.7%) 627 ( 3.1%)		20277 (95.7%)	913 (4.3%)
changement_dans_lappetit [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	12708 (62.7%) 2458 (12.1%) 4288 (21.2%) 817 ( 4.0%)		20271 (95.7%)	919 (4.3%)
mal_a_propos_de_vous_ou_que_vous_avez_laisse_tomber_votre_famille [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	15687 (77.4%) 3023 (14.9%) 1316 ( 6.5%) 250 ( 1.2%)		20276 (95.7%)	914 (4.3%)
difficulte_concentration_quotidienne [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	13503 (66.6%) 4546 (22.4%) 1960 ( 9.7%) 271 ( 1.3%)		20280 (95.7%)	910 (4.3%)
inquiet_tendu_anxieux [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	10319 (50.9%) 5376 (26.5%) 3900 (19.2%) 685 ( 3.4%)		20280 (95.7%)	910 (4.3%)
bouger_ou_parler_si_lentement_que_dautre [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	18281 (90.2%) 1645 ( 8.1%) 274 ( 1.4%) 78 ( 0.4%)		20278 (95.7%)	912 (4.3%)
sensation_etre_mieux_etant_mort_ou_penser_a_vous_faire_mal [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	19026 (93.8%) 916 ( 4.5%) 273 ( 1.3%) 62 ( 0.3%)		20277 (95.7%)	913 (4.3%)
douleurs_qui_ont_rendu_difficile_activite_quotidienne [ordered, factor]	1. pas du tout 2. un peu 3. la plus part du temps 4. tout le temps	12962 (63.9%) 4345 (21.4%) 2400 (11.8%) 568 ( 2.8%)		20275 (95.7%)	915 (4.3%)
impact_sur_activite_relation [ordered, factor]	1. pas du tout difficile 2. un peu 3. tres difficile 4. extremement difficile	0 ( 0.0%) 15268 (100.0%) 0 ( 0.0%) 0 ( 0.0%)		15268 (72.1%)	5922 (27.9%)

Dichotomized psychological symptoms

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
a_eu_maladie_et_assiste_mort_proche [factor]	1. non 2. oui	697 ( 3.4%) 19558 (96.6%)		20255 (95.6%)	935 (4.4%)
ressenti_peur_intense [factor]	1. non 2. oui	6082 (30.0%) 14161 (70.0%)		20243 (95.5%)	947 (4.5%)
souvenirs_repetitifs_et_envahissants_epidemie [factor]	1. non 2. oui	10726 (53.0%) 9526 (47.0%)		20252 (95.6%)	938 (4.4%)
reve_repetitif_epidemie_provoquant_sentiment_detresse [factor]	1. non 2. oui	15938 (78.7%) 4309 (21.3%)		20247 (95.5%)	943 (4.5%)
impression_revivre_scene_epidemie [factor]	1. non 2. oui	16390 (80.9%) 3864 (19.1%)		20254 (95.6%)	936 (4.4%)
sentiment_detresse_lorsque_exposition_evenement_epidemie [factor]	1. non 2. oui	13344 (65.9%) 6909 (34.1%)		20253 (95.6%)	937 (4.4%)
effort_eviter_pensee_traumatisme [factor]	1. non 2. oui	13808 (68.2%) 6446 (31.8%)		20254 (95.6%)	936 (4.4%)
effort_eviter_activite_qui_eveillent_souvenir_traumatisme [factor]	1. non 2. oui	14224 (70.2%) 6032 (29.8%)		20256 (95.6%)	934 (4.4%)
incapacite_deserappeler_aspect_important_epidemie [factor]	1. non 2. oui	16692 (82.4%) 3563 (17.6%)		20255 (95.6%)	935 (4.4%)
reduction_interet_pour_activite_valeur_significative_epidemie [factor]	1. non 2. oui	17575 (86.8%) 2680 (13.2%)		20255 (95.6%)	935 (4.4%)
sentiment_detachement_par_rapport_autre [factor]	1. non 2. oui	17321 (85.5%) 2928 (14.5%)		20249 (95.6%)	941 (4.4%)
restriction_affect [factor]	1. non 2. oui	17120 (84.5%) 3133 (15.5%)		20253 (95.6%)	937 (4.4%)
sentiment_avenir_bouche [factor]	1. non 2. oui	15540 (76.7%) 4708 (23.3%)		20248 (95.6%)	942 (4.4%)
difficulte_endormissement [factor]	1. non 2. oui	16237 (80.1%) 4022 (19.9%)		20259 (95.6%)	931 (4.4%)
instabilite_ou_exces_de_colere [factor]	1. non 2. oui	13821 (68.2%) 6439 (31.8%)		20260 (95.6%)	930 (4.4%)
difficulte_concentration [factor]	1. non 2. oui	14135 (69.8%) 6125 (30.2%)		20260 (95.6%)	930 (4.4%)
hyper_vigilance [factor]	1. non 2. oui	19618 (96.8%) 643 ( 3.2%)		20261 (95.6%)	929 (4.4%)
reaction_sursaut_exagere [factor]	1. non 2. oui	19695 (97.2%) 563 ( 2.8%)		20258 (95.6%)	932 (4.4%)
sentir_limite_en_raison_sante [factor]	1. autres 2. non 3. oui	388 ( 1.9%) 11046 (54.5%) 8821 (43.5%)		20255 (95.6%)	935 (4.4%)
suivi_psychologique_necessaire [factor]	1. non 2. oui	2589 (12.8%) 17671 (87.2%)		20260 (95.6%)	930 (4.4%)
refere_pour_des_soins_appropries [factor]	1. non 2. oui	19916 (99.0%) 209 ( 1.0%)		20125 (95.0%)	1065 (5.0%)
presentation_des_troubles_psychologiques [factor]	1. non 2. oui	7076 (35.2%) 13036 (64.8%)		20112 (94.9%)	1078 (5.1%)

14.3 Social

Dichotomized

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
bien_integre_dans_communaute [factor]	1. non 2. oui	1241 ( 6.1%) 19034 (93.9%)		20275 (95.7%)	915 (4.3%)
stigmatise_par_la_communaute [factor]	1. non 2. oui	18856 (93.0%) 1419 ( 7.0%)		20275 (95.7%)	915 (4.3%)
soutenu_par_la_famille [factor]	1. non 2. oui	869 ( 4.3%) 19406 (95.7%)		20275 (95.7%)	915 (4.3%)
soutenu_par_les_autres [factor]	1. non 2. oui	1819 ( 9.0%) 18459 (91.0%)		20278 (95.7%)	912 (4.3%)
visite_reguliere_famille_et_ami [factor]	1. non 2. oui	2041 (10.1%) 18234 (89.9%)		20275 (95.7%)	915 (4.3%)
reprendre_activite_habituelle [factor]	1. non 2. oui	4000 (19.8%) 16252 (80.2%)		20252 (95.6%)	938 (4.4%)

Semi-ordinal

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
blesse_par_reaction_des_gens [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	4422 (21.8%) 203 ( 1.0%) 15642 (77.2%)		20267 (95.6%)	923 (4.4%)
arret_relation_sociale [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	3632 (17.9%) 381 ( 1.9%) 16256 (80.2%)		20269 (95.7%)	921 (4.3%)
perdre_ami_a_cause_debola [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	3807 (18.8%) 285 ( 1.4%) 16177 (79.8%)		20269 (95.7%)	921 (4.3%)
faire_attention_pour_info_ebola [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	3184 (15.7%) 302 ( 1.5%) 16781 (82.8%)		20267 (95.6%)	923 (4.4%)
inquietude_sur_propagation_davoir_ebola [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	3141 (15.5%) 324 ( 1.6%) 16804 (82.9%)		20269 (95.7%)	921 (4.3%)
mauvaise_perception_sur_moi_acause_ebola [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	2845 (14.0%) 299 ( 1.5%) 17119 (84.5%)		20263 (95.6%)	927 (4.4%)
sensation_detre_sale_acause_ebola [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	2799 (13.8%) 339 ( 1.7%) 17127 (84.5%)		20265 (95.6%)	925 (4.4%)
me_sentir_mauvais_acause_ebola [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	2473 (12.2%) 345 ( 1.7%) 17450 (86.1%)		20268 (95.6%)	922 (4.4%)
personne_ayant_ebola_est_repoussable [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	3617 (17.9%) 507 ( 2.5%) 16139 (79.6%)		20263 (95.6%)	927 (4.4%)
peur_des_gens_ayant_eu_ebola [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	4591 (22.7%) 396 ( 2.0%) 15282 (75.4%)		20269 (95.7%)	921 (4.3%)
rejet_des_personnes_ayant_ebola [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	4239 (20.9%) 395 ( 1.9%) 15635 (77.1%)		20269 (95.7%)	921 (4.3%)
traitement_personne_ayant_eu_ebola_comme_paria [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	2396 (11.8%) 598 ( 3.0%) 17264 (85.2%)		20258 (95.6%)	932 (4.4%)
mal_alaise_au_milieu_des_gens_ayant_eu_ebola [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	2368 (11.7%) 434 ( 2.1%) 17464 (86.2%)		20266 (95.6%)	924 (4.4%)
personne_ayant_eu_ebola_est_sale [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	1815 ( 9.0%) 643 ( 3.2%) 17806 (87.9%)		20264 (95.6%)	926 (4.4%)
rejet_personne_ayant_ebola_par_autre [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	2491 (12.3%) 353 ( 1.7%) 17419 (86.0%)		20263 (95.6%)	927 (4.4%)
personne_ayant_eu_ebola_ne_doit_pas_soccuper_des_enfants [factor]	1. d’accord 2. ne sait pas 3. pas d’accord	2072 (10.2%) 409 ( 2.0%) 17783 (87.8%)		20264 (95.6%)	926 (4.4%)

14.4 Pregnancy and menstruation

Dichotomized

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
vouloir_etre_enceinte_apres_cte [factor]	1. non 2. nsp 3. oui	5544 (74.4%) 979 (13.1%) 927 (12.4%)		7450 (35.2%)	13740 (64.8%)
enceinte_apres_cte [factor]	1. non 2. oui	5344 (83.0%) 1097 (17.0%)		6441 (30.4%)	14749 (69.6%)
resultat_chaque_grossesse [factor]	1. résultats	1765 (100.0%)		1765 (8.3%)	19425 (91.7%)
grossesse_1 [factor]	1. résultats	1052 (100.0%)		1052 (5.0%)	20138 (95.0%)
resultat_grossesse_1 [factor]	1. accouchement voies basses 2. autres 3. avortement provoqué 4. césarienne 5. fausse couche	327 (41.3%) 237 (30.0%) 45 ( 5.7%) 97 (12.3%) 85 (10.7%)		791 (3.7%)	20399 (96.3%)
resultat_naissance_grossesse_1 [factor]	1. autres 2. bébé en bonne santé 3. mort-né 4. prématuré - décès un mois 5. prématuré vivant	226 (38.8%) 289 (49.6%) 28 ( 4.8%) 34 ( 5.8%) 6 ( 1.0%)		583 (2.8%)	20607 (97.2%)
grossesse_2 [factor]	1. résultats	142 (100.0%)		142 (0.7%)	21048 (99.3%)
resultat_grossesse_2 [factor]	1. accouchement voies basses 2. autre 3. avortement provoqué 4. césarienne 5. fausse couche	9 (12.3%) 21 (28.8%) 14 (19.2%) 23 (31.5%) 6 ( 8.2%)		73 (0.3%)	21117 (99.7%)
allaitement_apres_cte [factor]	1. non 2. oui	6200 (88.5%) 804 (11.5%)		7004 (33.1%)	14186 (66.9%)
raison_non_allaitement [factor]	1. autre, préciser 2. j’avais peur à cause de m 3. je n’ai pas assez de lait 4. on m’a dit que je ne deva	5449 (89.5%) 171 ( 2.8%) 83 ( 1.4%) 387 ( 6.4%)		6090 (28.7%)	15100 (71.3%)
description_cycle_menstruel_avant_ebola [factor]	1. autre préciser 2. je n’avais pas mes règles 3. moins d’une fois par mois 4. plus d’une fois par mois 5. une fois par mois	509 ( 8.8%) 218 ( 3.8%) 142 ( 2.5%) 287 ( 5.0%) 4603 (79.9%)		5759 (27.2%)	15431 (72.8%)
raison_pas_regle_avant_ebola [factor]	1. autre préciser 2. j’allaitais 3. j’étais enceinte 4. je prenais des médicament 5. mes règles se sont arrêté 6. mes règles se sont arrêté	1041 (37.2%) 133 ( 4.8%) 610 (21.8%) 136 ( 4.9%) 337 (12.1%) 539 (19.3%)		2796 (13.2%)	18394 (86.8%)
description_cycle_menstruel_apres_ebola [factor]	1. autre preciser 2. je n’ai pas eu mes règles 3. moins’d’une fois par mois 4. plus d’une fois par mois 5. une fois par mois	449 ( 8.4%) 217 ( 4.0%) 118 ( 2.2%) 227 ( 4.2%) 4351 (81.1%)		5362 (25.3%)	15828 (74.7%)
debut_regle_apres_cte [factor]	1. résultats	4646 (100.0%)		4646 (21.9%)	16544 (78.1%)
changement_couleur_regle [factor]	1. non 2. oui	4074 (95.4%) 196 ( 4.6%)		4270 (20.2%)	16920 (79.8%)
decrire_couleur_regle [factor]	1. Abondante 2. ABONDAT 3. ACTUEL 4. Bright red 5. caillot 6. l’eau 7. LE MOIS SUIVANT LA GUERIS 8. MECROPASQUE 9. menopose 10. Menorrhagia [ 7 others ]	1 ( 0.4%) 20 ( 8.1%) 16 ( 6.5%) 43 (17.5%) 2 ( 0.8%) 1 ( 0.4%) 4 ( 1.6%) 1 ( 0.4%) 1 ( 0.4%) 11 ( 4.5%) 146 (59.3%)		246 (1.2%)	20944 (98.8%)
flux_regles_differents [factor]	1. non 2. oui	3738 (88.8%) 472 (11.2%)		4210 (19.9%)	16980 (80.1%)
raison_pas_regle_apres_ebola [factor]	1. autre préciser 2. autre. préciser 3. j’allaitais 4. j’étais enceinte 5. je prenais des médicament 6. mes régies se sont arrêté 7. mes règles se sont arrêté	606 (23.0%) 329 (12.5%) 151 ( 5.7%) 533 (20.2%) 136 ( 5.2%) 519 (19.7%) 361 (13.7%)		2635 (12.4%)	18555 (87.6%)

Numeric

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
nombre_grossesse_apres_cte numeric	Mean (sd) : 1 (0.5) min < med < max: 0 < 1 < 4 IQR (CV) : 0 (0.5)	0 : 88 ( 8.9%) 1 : 818 (83.0%) 2 : 67 ( 6.8%) 3 : 4 ( 0.4%) 4 : 8 ( 0.8%)		985 (4.6%)	20205 (95.4%)
duree_grossesse_1 numeric	Mean (sd) : 6 (3) min < med < max: 0 < 6 < 14 IQR (CV) : 6 (0.5)	12 distinct values		832 (3.9%)	20358 (96.1%)
duree_grossesse_2 numeric	Mean (sd) : 5.5 (2.9) min < med < max: 1 < 6 < 9 IQR (CV) : 6.2 (0.5)	1 : 8 (11.1%) 2 : 10 (13.9%) 3 : 3 ( 4.2%) 4 : 2 ( 2.8%) 5 : 12 (16.7%) 6 : 4 ( 5.6%) 7 : 13 (18.1%) 8 : 1 ( 1.4%) 9 : 19 (26.4%)		72 (0.3%)	21118 (99.7%)

14.5 Laboratory

Numeric

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
cmd_np numeric	Min : 0 Mean : 0.4 Max : 37	0 : 1037 (99.0%) 37 : 10 ( 1.0%)		1047 (4.9%)	20143 (95.1%)
gp_sperme numeric	Mean (sd) : 0.2 (1.6) min < med < max: 0 < 0 < 39.1 IQR (CV) : 0 (8.8)	5 distinct values		712 (3.4%)	20478 (96.6%)
np_sperme numeric	Mean (sd) : 0.2 (2.5) min < med < max: 0 < 0 < 42.7 IQR (CV) : 0 (11.6)	6 distinct values		698 (3.3%)	20492 (96.7%)
resultat_alt_sgpt numeric	Mean (sd) : 22.6 (13.3) min < med < max: 10 < 19 < 87 IQR (CV) : 14 (0.6)	17 distinct values		166 (0.8%)	21024 (99.2%)
resultat_ast_sgo numeric	Mean (sd) : 33.6 (11.2) min < med < max: 21 < 31 < 63 IQR (CV) : 13 (0.3)	17 distinct values		166 (0.8%)	21024 (99.2%)
resultat_bilirubine numeric	Mean (sd) : 0.9 (0.3) min < med < max: 0.4 < 1 < 1.4 IQR (CV) : 0.5 (0.4)	10 distinct values		166 (0.8%)	21024 (99.2%)
resultat_creatinine numeric	Mean (sd) : 1 (0.8) min < med < max: 0.2 < 0.8 < 4.2 IQR (CV) : 0.6 (0.8)	14 distinct values		186 (0.9%)	21004 (99.1%)
resultat_potassium numeric	Mean (sd) : 4.6 (3.8) min < med < max: 2.5 < 4.1 < 40 IQR (CV) : 0.5 (0.8)	18 distinct values		180 (0.8%)	21010 (99.2%)
resultat_uree numeric	Mean (sd) : 8.5 (2.3) min < med < max: 5 < 8 < 17 IQR (CV) : 2 (0.3)	5 : 11 ( 5.9%) 6 : 9 ( 4.8%) 7 : 59 (31.7%) 8 : 23 (12.4%) 9 : 42 (22.6%) 10 : 8 ( 4.3%) 11 : 2 ( 1.1%) 12 : 21 (11.3%) 13 : 9 ( 4.8%) 17 : 2 ( 1.1%)		186 (0.9%)	21004 (99.1%)
resultat_glucose numeric	Mean (sd) : 90.1 (16.8) min < med < max: 10 < 90 < 122 IQR (CV) : 16 (0.2)	26 distinct values		183 (0.9%)	21007 (99.1%)
resultat_calcium numeric	Mean (sd) : 67.8 (39.3) min < med < max: 9 < 84 < 142 IQR (CV) : 51 (0.6)	9 : 13 (12.9%) 10 : 11 (10.9%) 40 : 13 (12.9%) 84 : 15 (14.9%) 86 : 4 ( 4.0%) 91 : 20 (19.8%) 97 : 1 ( 1.0%) 98 : 7 ( 6.9%) 99 : 12 (11.9%) 142 : 5 ( 5.0%)		101 (0.5%)	21089 (99.5%)
resultat_sodium numeric	Mean (sd) : 135 (5) min < med < max: 129 < 134 < 167 IQR (CV) : 5.5 (0)	14 distinct values		179 (0.8%)	21011 (99.2%)
resultat_wbc numeric	Mean (sd) : 5779.8 (1544.8) min < med < max: 3600 < 5400 < 11000 IQR (CV) : 1350 (0.3)	24 distinct values		168 (0.8%)	21022 (99.2%)
resultat_fl numeric	Mean (sd) : 6566 (16685) min < med < max: 4.4 < 48 < 57435.7 IQR (CV) : 45.5 (2.5)	33 distinct values		163 (0.8%)	21027 (99.2%)
resultat_hematocrite numeric	Mean (sd) : 40 (7.3) min < med < max: 13.7 < 40 < 88.7 IQR (CV) : 3.6 (0.2)	27 distinct values		157 (0.7%)	21033 (99.3%)
resultat_hemoglobine numeric	Mean (sd) : 14.9 (4.1) min < med < max: 4.2 < 14.4 < 38 IQR (CV) : 2.1 (0.3)	27 distinct values		162 (0.8%)	21028 (99.2%)
resultat_plaquettes numeric	Mean (sd) : 207574.5 (227486.4) min < med < max: 19 < 188000 < 1612000 IQR (CV) : 270200 (1.1)	34 distinct values		157 (0.7%)	21033 (99.3%)
gp_lait_allaitante_sortie_cte [MV 1] numeric	Mean (sd) : 13.5 (19.3) min < med < max: 0 < 0 < 44.7 IQR (CV) : 37.5 (1.4)	15 distinct values		177 (0.8%)	21013 (99.2%)
np_lait_allaitante_sortie_cte [MV 1] numeric	Mean (sd) : 18.3 (17.9) min < med < max: 0 < 29.6 < 40.2 IQR (CV) : 35.5 (1)	20 distinct values		177 (0.8%)	21013 (99.2%)

Factors

Variable	Stats / Values	Freqs (% of Valid)	Graph	Valid	Missing
gp [factor]	1. negatif 2. positif	18152 (91.3%) 1732 ( 8.7%)		19884 (93.8%)	1306 (6.2%)
np [factor]	1. negatif 2. positif	18145 (91.3%) 1739 ( 8.7%)		19884 (93.8%)	1306 (6.2%)
tdr_palu [factor]	1. négatif 2. positif	2033 (91.8%) 181 ( 8.2%)		2214 (10.4%)	18976 (89.6%)
grossesse [factor]	1. négatif 2. positif	847 (83.9%) 163 (16.1%)		1010 (4.8%)	20180 (95.2%)
test_vih [factor]	1. indétermine 2. négatif 3. non fait 4. positif	5 ( 0.6%) 733 (85.5%) 68 ( 7.9%) 51 ( 6.0%)		857 (4.0%)	20333 (96.0%)
serologie_resultat_ebola [factor]	1. indétermine 2. négatif 3. non fait 4. positif	1 ( 0.0%) 2402 (89.1%) 14 ( 0.5%) 278 (10.3%)		2695 (12.7%)	18495 (87.3%)